Arise old thread! So I'm having this problem too. My ship is perpetually out of the inner circle in the VAB. I have tried shift-clicking from every possible perspective I can think of. Top looking down, down looking up, from the sides and various angles, etc. But I cannot get back into the center circle. I've tried looking for craft editors for the sole purpose of resetting my craft position. Does anyone know of any other ways to resolve this issue?