I just fixed mine, I've been so mad I haven't played the game in months, I just can't stand docking or landing with the keyboard! I've had an itch for KSP the last couple of days, so I decided to sit down and figure this out... So here's what I did, with my Logitech Extreme 3D Pro: 1. Close KSP.exe 2. Visit http://support.logitech.com/product/extreme-3d-pro and download the joystick's gaming software (~15mb) Note: If you have another Logitech controller other than the Extreme 3D Pro, browse the site for the software specifically designed for the controller in your possession. 3. Install software and set-up, once installed and the software is running, continue to step 4. 4. In the Logitech Profiler application, select "Select A Game", and "Create new game profile". Using your file browser, find the KSP.exe icon and select it. (It would not show up automatically for me, which could explain why Microsoft Flight Simulators liked my joystick and KSP didn't, this is a logitech auto-detect software inadequacy, not a Squad/KSP bug) 5. Now enter your KSP file folder and delete the "Settings.cfg" file, this will remove any key binding you had previously set, but it's worth it! 6. Ensure your Logitech Profiler is running, close all windows, and run KSP.exe 7. In KSP.exe, go to Settings -> Input -> Flight. On the right side column, you should now be able to assign Axis Bindings, which will enable you to control spaceships(And Planes) with a Logitech 3D!!!