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Mechjeb, Trajectories, ScienceAlert, VOID

Anyone else having problems with fairing separation? Whenever I use struts to secure stuff to the fairings, when I want to open the fairing it will blow off and destroy everything inside.

I'm having issues with the Mechjeb maneuver node. It mainly happens when transferring to another planet, the problem is that the node keeps jumping, so Mechjeb can't figure out which way to face the ship. I noticed this in 0.25 as well but haven't been able to figure it out since. Does anyone else have this issue?