Major mods I have installed are RO, RP-0, RSS, Remote Tech, Dmagic Orbital Science, AIES. I first noticed that I was not gaining science (via transmission) during a flyby of Venus. Some experiments gave science (temperature, pressure, magnometer boom) while others did not (meteorite, geiger, telemetry). For both working and non-working experiments, the transmission completes and says "done" but for the non-working experiments, no green text shows up saying science has been added. I later added [x] Science and noticed that my recent Mars flyby produced similar results that I did not notice. It hasn't always been like this because I have telemetry data from space around the Moon and from the surface of the Moon. My output log can be found at https://www.dropbox.com/s/yo8fyuf7tu2npqc/output_log.txt?dl=0.
This problem is game breaking for me since I am potentially missing out on hundreds of points of science. I have uninstalled all mods and reinstalled them using CKAN but that did not help. I also replaced my remotetech.dll file with one that Fancymouse had modified to fix a similar sounding issue and that also did not resolve it. Any help at all is greatly appreciated. If needed, I can provide screenshots showing examples of what I mean when I get home later.