Spartankh

Sorry if this is answered somewhere in this thread but I extracted the game data file and noticed a lot of mods I already have installed like EVE, kopernicus, modular flight integrator, scatterer, texture replacer and module manager. So should I remove the ones I already have installed from my mods list, remove the ones I already have from this mods list or don't worry and it's all supposed to be like that and should work fine?