I seem to be having a similar issue to RoggenHans. I have installed the new 1.3.4 pre-release version of the mod. It shows up in CKAN as 'AD' for both AutomatedScienceSampler and for KerboKatzUtilities. The mod shows up in game and I can select settings but no automated science is ever done. I still need to run everything manually. I have a similar setup to RoggenHans as well running nearly all the same mods used by Quill18 in his recent 1.3 modded career.
Link to Output_log
*Edit*
After messing around I went into the Settings.xml file in ...\Kerbal Space Program\GameData\KerboKatz\AutomatedScienceSampler\PluginData and found the settings in this XML did not match the settings I have configured in game on the KerboKatz GUI. Every setting in this XML was set to false, but many were toggled on within the GUI in game. I set some to true and false here depending on what I wanted and it worked for one mission, but then eventually this file seems to be overwritten and things are reset to false. I am still doing some tests. Should this XML file also exist in ...\Kerbal Space Program\GameData\KerboKatz\PluginData ??
<?xml version="1.0" encoding="utf-8"?>
<Settings xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xmlns:xsd="http://www.w3.org/2001/XMLSchema">
<debug>false</debug>
<uiFadeSpeed>0.25</uiFadeSpeed>
<uiElements>
<UIData>
<name>AutomatedScienceSampler</name>
<position>
<x>1012.99988</x>
<y>-25</y>
<z>0</z>
</position>
<active>false</active>
</UIData>
</uiElements>
<showSettings>false</showSettings>
<spriteFPS>55</spriteFPS>
<craftSettings>
<PerCraftSetting>
<guid>Single</guid>
<threshold>2</threshold>
<runAutoScience>true</runAutoScience>
<oneTimeOnly>true</oneTimeOnly>
<resetExperiments>true</resetExperiments>
<hideScienceDialog>false</hideScienceDialog>
<transferAllData>false</transferAllData>
<dumpDuplicates>true</dumpDuplicates>
<doEVAOnlyIfGroundedWhenLanded>false</doEVAOnlyIfGroundedWhenLanded>
<currentContainer>0</currentContainer>
</PerCraftSetting>
</craftSettings>
<perCraftSetting>false</perCraftSetting>
<lastGUID>Single</lastGUID>
<refreshTime>1</refreshTime>
<interruptTimeWarp>true</interruptTimeWarp>
<dropOutOfWarp>true</dropOutOfWarp>
<useKKToolbar>true</useKKToolbar>
</Settings>