Hi everyone, my problem is about stages merging after undocking. I landed on Mun and run out of fuel. I sent refuel station with normal Docking Port connected to hinge and pistons so I can manuever docking port independently much like an arm. I got crafts closer, and docked. Transfered the fuel and everything is fine upto this point. When I undocked I saw that I can no longer control my main craft, it doesn't have a name and even though two crafts undocked I can control both simultaneously like it is a single craft, stages got merged and can't get crafts separated. Is this a bug or am I doing something wrong. ( I don't want to send a capsule to get my crew back, I want that particular craft back for challenge)
TLDR: I docked with normal Docking Port that is connected to pistons and hinges, transfered fuel, undocked and crafts and stages got merged even after undocking.
Any ideas? Thanks in advance.