Exactly what other people have said, You need to change your ships orbit in order to catch your target. If you're behind the target, lower your periapsis by 10km or so, time warp, and watch as you magically start closing the gap between you and the target when your orbit do pass close again. When you get close enough, then you just have to start using the target on the navball and retrograde / prograde points. But yes, you have to just forget about having a perfect orbit while rendezvousing, Your orbit might go all over the place (If it says you're going to hit Kerbin, you've gone wrong somewhere) but when you get close enough, the orbits and speeds will be so similar that they'll have almost matched eachother.