Aerobreaking causing my AP to INcrease? What gives?

[Biggz1313]

So I've been playing a science sandbox mode for a few weeks now one 1.0.5 (have not updated past that) and today I loaded up the game and went to continue a journey back from minmus.  I got my Pe down to 40km, and my Ap was at around 500km.  No matter what I do, when start to enter the thicker part of the atmosphere, instead of my Ap coming down (like it's always done) it now actually starts to go up.  I don't know what broke my game, but it doesn't seem to be acting correctly.  I had an issue when I first updated to 1.0.5 where steam auto updated my game,and because it was modded, my aero physics were F'd and I couldn't safely return a pod to kerbin because parachutes wouldn't open.  Do you think this could be a similar issue?  I haven't updated my KSP since I started this science sandbox and the 4 mods that just updated before playing were Community Resource Pack 0.5.0.0, Contract Configurator, ModularFlightIntegrator 1.1.3.0, and Trajectories 1.4.6.  Can any of those mod updates break my game?  Thank you so much in advance.

[Biggz1313]

Please mark as Solved.  Anyone who's interested or having the same problem.  Here is the solution.  https://www.reddit.com/r/KerbalSpaceProgram/comments/4cntv6/z/d1kbidh