VAB not keeping staging sequence for when making changes

[Chaosratt]

I seem to have a problem where if I make any modifications to an upper stage by moving the lower stages away (say to add a part in-line, like a reaction wheel) to an upper stage, when the lower stage is reattached it's lost all of its staging sequence info, like asparagus staging. I never remember having this issue before and have no clue when it occurred. I only just noticed it now as I've reached the point in my science game that asparagus staging is useful/needed for some larger lifters. This also applies to subassemblies as I make extensive use of the Zenith lifter family, and some of my own design. In 1.0.4 ( I did not play with 1.0-1.0.4) they will not save the asparagus staging info, and I end up with a fist stage that has all the engines, decouplers, and sepratrons lumped together. I'm completely at a loss of how to even begin to troubleshoot this. I've nuked as many mods as I could, basically the "cool, but Im not really using them" stuff.

I've googled around a bit, but my google-fu is failing me, best I can determine the subassembly problem was a known issue when it first came about, but no one is talking about it recently that I can tell.

Note, I must play in either openGL or DX11, as the default game crashes before even getting to the main menu, this problem occurs both ways.

Installed mods (provided by ckan):

• [X] Science (xScience 4.8)
  
• Action Groups Extended (AGExt 1.33a)
  
• Adjustable Landing Gear (AdjustableLandingGear v1.2.0)
  
• ALCOR (ALCOR 0.9.4)
  
• ALCOR IVA Patch (ALCORIVAPatch 0.9.4)
  
• Alcubierre Warp Drive (Stand-alone) (AlcubierreStandalone 0.2.1)
  
• Alternate Resource Panel (AlternateResourcePanel 2.7.3.0)
  
• ASET Props (ASETProps 1.3)
  
• Asteroid Day (AsteroidDay 1.0)
  
• BahamutoD Animation Modules (BDAnimationModules v0.6.2)
  
• Community Resource Pack (CommunityResourcePack 0.4.4)
  
• Community Tech Tree (CommunityTechTree 2.1)
  
• Connected Living Space (ConnectedLivingSpace 1.1.3.1)
  
• Crew Manifest (CrewManifest 0.6.0)
  
• Cryogenic Engines (CryoEngines 1:0.1.10)
  
• Cryogenic Engines Extras: LFO Patch (CryoEngines-LFO 1:0.1.10)
  
• DMagic Orbital Science (DMagicOrbitalScience 1.0.8)
  
• Docking Port Alignment Indicator (DockingPortAlignmentIndicator 6.2.0)
  
• EVAManager (EVAManager 6)
  
• Extraplanetary Launchpads (ExtraPlanetaryLaunchpads 5.2.2)
  
• Firespitter Core (FirespitterCore v7.1.4)
  
• Firespitter Resources config (FirespitterResourcesConfig v7.1.4)
  
• Improved Chase Camera (ImprovedChaseCamera v1.5.1)
  
• Interstellar Fuel Switch (InterstellarFuelSwitch 1.16)
  
• Interstellar Fuel Switch Core (InterstellarFuelSwitch-Core 1.16)
  
• Karbonite (Karbonite 0.6.4)
  
• Kerbal Aircraft Expansion (KAX) (KerbalAircraftExpansion v2.5.2)
  
• Kerbal Alarm Clock (KerbalAlarmClock v3.4.0.0)
  
• Kerbal Attachment System (KAS 0.5.4)
  
• Kerbal Engineer Redux (KerbalEngineerRedux 1.0.18.0)
  
• Kerbal Flight Indicators (KerbalFlightIndicators R10pre)
  
• Kerbal Foundries Wheels and Repulsors ALPHA (KerbalFoundries Beta_19.
  
• Kerbal Inventory System (KIS 1.2.2)
  
• Kerbal Planetary Base Systems (KerbalPlanetaryBaseSystems 0.2.4)
  
• Klockheed Martian General Plugin Functions - Gimbal module (KlockheedMartian-Gimbal 3.0.4.0)
  
• KSP AVC (KSP-AVC 1.1.5.0)
  
• Magic Smoke Industries Infernal Robotics (InfernalRobotics v0.21.3)
  
• MechJeb 2 (MechJeb2 2.5.3)
  
• MechJeb and Engineer for all! (MechJebForAll 1.2.0.0)
  
• Menu Stabilizer (MenuStabilizer 1)
  
• Mk2 cockpit expansion (Mk2CockpitExpansion 1.2.5)
  
• Mk2 Stock-a-like Expansion (Mk2Expansion 1.5.1)
  
• Module Manager (ModuleManager 2.6.8)
  
• ModuleRCSFX (ModuleRCSFX v4.2)
  
• Near Future Construction (NearFutureConstruction 0.5.4)
  
• Near Future Electrical (NearFutureElectrical 0.5.3)
  
• Near Future Electrical Core (NearFutureElectrical-Core 0.5.3)
  
• Near Future IVA Props (NearFutureProps 0.4.3)
  
• Near Future Propulsion (NearFuturePropulsion 0.5.3)
  
• Near Future Solar (NearFutureSolar 0.5.3)
  
• Near Future Spacecraft Parts (NearFutureSpacecraft 0.4.3)
  
• No More Science Grinding (NMSG 1.3)
  
• OPT Space Plane Parts (OPTSpacePlaneParts V1.7)
  
• Procedural Fairings (ProceduralFairings v3.15)
  
• Radial Engine Mounts by PanaTee Parts International (RadialEngineMountsPPI v0.40)
  
• RasterPropMonitor (RasterPropMonitor v0.22.2)
  
• RasterPropMonitor Core (RasterPropMonitor-Core v0.22.2)
  
• SCANsat (SCANsat v14.2)
  
• ScienceAlert (ScienceAlert 1.8.9)
  
• Ship Manifest (ShipManifest 4.4.1.1)
  
• SmokeScreen - Extended FX Plugin (SmokeScreen 2.6.9)
  
• SXT - Stock eXTension (SXT 22.2)
  
• TAC Fuel Balancer (TacFuelBalancer v2.5.1)
  
• Throttle Controlled Avionics - Continued (ThrottleControlledAvionics 2.3.0.1)
  
• ToadicusTools (ToadicusTools 15)
  
• Toolbar (Toolbar 1.7.9)
  
• Trajectories (Trajectories v1.4.3)
  
• Tweakable Everything - Engine Staging Toggle (TweakableEverything-EngineStagingToggle 1.12)
  
• Tweakable Everything - Fairing Staging Toggle (TweakableEverything-FairingStagingToggle 1.12)
  
• TweakableEverything (TweakableEverything 1.12)
  
• TweakScale - Rescale Everything! (TweakScale v2.2.1)
  
• Universal Storage (UniversalStorage 1.1.0.7)
  
• USI Exploration Pack (USI-EXP 0.4.1)
  
• USI Freight Transport Technologies (USI-FTT 0.4.1)
  
• USI Life Support (USI-LS 0.1.5)
  
• USI Tools (USITools 0.4.2)
  
• Waypoint Manager (WaypointManager 2.4.2)
  

[Padishar]

Please start a new session of KSP , trigger the problem, quit and then upload your output_log.txt somewhere and post a link here.