Unfortunately I don't think I can reproduce it. I was turning off the shroud (tweakable everything) in 1.0.4 to avoid this issue. I tried the shrouds again for a week or so after 1.0.5 released and had the problem again (once) on a duna mission with multiple scene reloads. I've been turning off the shrouds again since.
Ill give it another shot and see what happens.