So uh.. I'm having this problem.
Last night I started with RemoteTech and got a nice satellite system set up around Kerbin all nice and good, and started on the Mun
This afternoon, my satellites are no longer connecting in chain and are instead connecting THROUGH planetary bodies. Like my Munsat is connected through the Mun and through Kerbin right to the Space Center, regardless of line of sight.
Knowing my luck this will be something incredibly obvious that I'm just not seeing