I just spent 4 hours reading this entire thread.
Wow Parkaboy, this is EPIC!
I'm really looking forward to seeing where you take the story next.
as a side note: in the mars trilogy, Kim Stanley Robinson had his characters on phobos (or diemos?) suffering in microgravity. their solution was to build a train track around the moon (tiny little potato moon) and they spent their non-working hours living in a train zooming around the moon in what was effectivly a very large diameter centrefuge. not sure if its possibe to actualy build as functional in ksp, but a bit of cubic octagonal monorail just long enough for a screen shot with a stationary rover hab on it shouldn't be too much hassle.