I'm running the game on windows with -force-opengl flag. I've just noticed that that this problem happens only after alt-tabbing.
Entering the settings menu and applying settings without any changes fixes this problem untill next alt-tabbing.
Enter the space center screen, press the ESC button, than choose the settings menu and apply settings.
Enter the tracking station. In my case, the problem disappears.
Alt-tab from the game and than back. The problem is now present again.