Hi Liasias,
I got four "Show Stoppers" after starting my game. Btw. the CKAN installation broke on my computer too. It only installed the three patchfiles (MarkIV.cfg, ...) from the main directory. A manual installation fixed that in my case too.
I was rather surprised (in a positive way) that I got only four fatale errors (I have more than 200 mods installed). So I looked into the files but couldn't find the problem. The log extraction:
The cause is "Fuel Tank Expansion Rebuilt" currently maintained by linuxgurugamer (many thanks to you, @linuxgurugamer, for your fantastic work, keeping those mods alive!). But none of this four parts seem to differ from e.g. the part "MI_Radial_Wedge_SM_S" that is also a part of this mod and isn't reported.
What I can I do to find the source of this problem?