This mod does not replace stock tech tree nodes. It adds some new nodes to it. So it compatible with mods, that adds techs to stock tech tree nodes. I guess,you cannot use another TreeLoader config http://forum.kerbalspaceprogram.com/threads/58135-TechTree-0-22-Milestone18-Realistic-Progression-LITE-%28Get-on-TreeLoader!%29?highlight=TreeLoader, for example, if you use interstellar treeloader config. Definitely, interstellar is not compatible with planetfactory (no resources, antimatter collectors and science on new planets). I have tried many mods but no other incompatibilities found. Liquid Chromatograph Mass Spectrometer can detect it. In oceans. No map - it everwhere in any ocean. It seems some plugin files was broken. Try redownload it. No incompatibilities with these mods